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memory problem
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0
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750
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split champ.load for large number of samples
memory problem
champ.load
6.5 years ago
petra.lenzini
• 0
0
votes
4
replies
1.2k
views
DESeq2 memory allocation question
deseq2
memory problem
updated 6.5 years ago by
Michael Love
43k • written 6.5 years ago by
rbronste
▴ 60
1
vote
2
replies
1.2k
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 6.6 years ago by
Martin Morgan
25k • written 6.6 years ago by
perdedorium
• 0
0
votes
1
reply
1.1k
views
ProcessAmplicons using very little memory on big job?
edgeR
processamplicons
memory problem
6.8 years ago
sdalin
• 0
0
votes
3
replies
2.0k
views
GAIA package Error: cannot allocate vector of size 852.1 Mb
memory problem
gaia
updated 7.4 years ago by
Sandro Morganella
▴ 40 • written 7.4 years ago by
drusmanbashir
• 0
2
votes
3
replies
1.9k
views
Problem with memory limit in Rstudio/Windows when importing Affymetrix HTA 2.0 CEL files with oligo R package
oligo
hta2.0
affymetrix microarrays
memory problem
updated 8.1 years ago by
James W. MacDonald
68k • written 8.1 years ago by
svlachavas
▴ 840
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Comment: Intepretation of results
by
Tom
• 0
[Locksmith Wombwell][1] I have been interested in using AUCell as a way to determine significantly enriched pathways in my single cell spat…
Comment: Gene Ontology (GO) Analysis
by
Tom
• 0
[Locksmith near me][1] Hello, I'm learning about Gene Ontology analysis. I'm trying to understand the difference between the hyperGTest fun…
Comment: DiffBind; Error: No sites have activity greater than filter value
by
etiennedanis
• 0
Same issue here as well. This is very weird because I never had this issue before. I started observing this issue with a new ATAC-seq da…
Comment: GSEA preranked analysis downstream of DEseq2
by
Ajay
• 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file
by
janwilseo
• 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
Votes
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
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